Transcript: ENSDART00000167996.2 glrx2-203

Description

glutaredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040718-101]

Location

Chromosome 22: 24,214,721-24,218,951 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 158 variant alleles and maps to 161 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100944.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162227.2	glrx2-201	1003	170aa	ENSDARP00000136884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000167996.2	glrx2-203	788	152aa	ENSDARP00000140532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXU6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000163980.2	glrx2-202	575	162aa	ENSDARP00000133122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 788 bps, Translation length: 152 residues

Version

ENSDART00000167996.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000167996.2 glrx2-203

Summary

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Transcript: ENSDART00000167996.2 glrx2-203

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