Transcript: ENSDART00000167956.3 TSPAN18-201

Description

tetraspanin 18a [Source:ZFIN;Acc:ZDB-GENE-040718-232]

Location

About this transcript

This transcript has 9 exons, is annotated with 28 domains and features, is associated with 1381 variant alleles and maps to 162 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134717.3	TSPAN18-202	1621	253aa	ENSDARP00000114616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2BK40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000186464.1	TSPAN18-203	1919	241aa	ENSDARP00000149840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGC4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167956.3	TSPAN18-201	1297	241aa	ENSDARP00000131977.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGC4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,297 bps, Translation length: 241 residues

Version

ENSDART00000167956.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.