Transcript: ENSDART00000167735.2 RAB6A-202

Description

RAB6A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2849]

Location

Chromosome 10: 36,701,840-36,705,717 forward strand.

About this transcript

This transcript has 3 exons, is associated with 151 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000103714.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169015.2	RAB6A-204	4092	208aa	ENSDARP00000130990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9ULS4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000171392.2	RAB6A-201	2961	208aa	ENSDARP00000134740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1P3Z5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000166992.2	RAB6A-203	751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000167735.2	RAB6A-202	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 616 bps,

Version

ENSDART00000167735.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000167735.2 RAB6A-202

Summary

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Transcript: ENSDART00000167735.2 RAB6A-202

Summary

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