Transcript: ENSDART00000167672.2 BABAM1-202

Description

BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]

Location

Chromosome 11: 6,060,535-6,068,375 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 415 variant alleles and maps to 67 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077526.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000122262.3	BABAM1-203	2035	370aa	ENSDARP00000108272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AXK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000008980.8	BABAM1-204	1888	370aa	ENSDARP00000015195.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AXK4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162776.2	BABAM1-201	802	197aa	ENSDARP00000133269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167672.2	BABAM1-202	790	240aa	ENSDARP00000136325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 790 bps, Translation length: 240 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000167672.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000167672.2 BABAM1-202

Summary

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Transcript: ENSDART00000167672.2 BABAM1-202

Summary

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