Transcript: ENSDART00000167670.3 pop4-203

Description

POP4 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050522-505]

Gene Synonyms

zgc:110597

Location

About this transcript

This transcript has 7 exons, is associated with 14 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000163098.2	pop4-201	1069	219aa	ENSDARP00000137725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITA6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167670.3	pop4-203	941	43aa	ENSDARP00000141622.1	Nonsense mediated decay	A0A0R4IWU0	-
ENSDART00000165691.2	pop4-202	389	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 941 bps, Translation length: 43 residues

Version

ENSDART00000167670.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.