Transcript: ENSDART00000167606.2 HOXA3-207

Description

homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]

Location

Chromosome 19: 19,756,425-19,777,710 forward strand.

About this transcript

This transcript has 5 exons, is associated with 8 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000103862.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170662.2	HOXA3-205	2202	410aa	ENSDARP00000139302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8AWZ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000163611.2	HOXA3-201	2200	410aa	ENSDARP00000130226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8AWZ2	-
ENSDART00000182028.1	HOXA3-211	1725	410aa	ENSDARP00000152861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8AWZ2	-
ENSDART00000187604.1	HOXA3-210	1519	410aa	ENSDARP00000152675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8AWZ2	-
ENSDART00000169074.2	HOXA3-202	1345	245aa	ENSDARP00000134767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9PWL5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164677.2	HOXA3-204	816	109aa	ENSDARP00000138653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000161019.2	HOXA3-203	492	33aa	ENSDARP00000133275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167606.2	HOXA3-207	405	8aa	ENSDARP00000139163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000163697.2	HOXA3-208	358	11aa	ENSDARP00000136820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000164968.2	HOXA3-206	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000158987.2	HOXA3-209	438	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 1, Transcript length: 405 bps, Translation length: 8 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000167606.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000167606.2 HOXA3-207

Summary

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Transcript: ENSDART00000167606.2 HOXA3-207

Summary

About Us

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