Transcript: ENSDART00000167580.2 map7d1b-204

Description

MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]

Gene Synonyms

zgc:172238

Location

Chromosome 19: 3,940,025-3,973,567 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 16 domains and features, is associated with 3 variant alleles and maps to 25 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000104701.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159605.2	map7d1b-201	3010	728aa	ENSDARP00000136935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167580.2	map7d1b-204	1027	343aa	ENSDARP00000134982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILU5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000165541.2	map7d1b-203	952	223aa	ENSDARP00000131227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ46	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000162532.2	map7d1b-202	599	21aa	ENSDARP00000134657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IL79	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,027 bps, Translation length: 343 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000167580.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000167580.2 map7d1b-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000167580.2 map7d1b-204

Summary

About Us

Get help

Our sister sites

Follow us