Transcript: ENSDART00000167269.2 twsg1a-201

Description

twisted gastrulation BMP signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-010509-2]

Location

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 307 variant alleles and maps to 103 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172309.3	twsg1a-202	5454	217aa	ENSDARP00000129959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1WB83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183426.1	twsg1a-203	3826	217aa	ENSDARP00000153120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1WB83	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167269.2	twsg1a-201	3485	142aa	ENSDARP00000136772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 3,485 bps, Translation length: 142 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000167269.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.