Transcript: ENSDART00000167201.2 trim35-25-202

Description

tripartite motif containing 35-25 [Source:ZFIN;Acc:ZDB-GENE-060503-484]

Location

Chromosome 3: 7,920,211-7,940,635 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 27 domains and features, is associated with 229 variant alleles and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101055.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000167201.2	trim35-25-202	1462	447aa	ENSDARP00000134771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000159710.2	trim35-25-201	876	292aa	ENSDARP00000131341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,462 bps, Translation length: 447 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000167201.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000167201.2 trim35-25-202

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Transcript: ENSDART00000167201.2 trim35-25-202

Summary

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