Transcript: ENSDART00000167159.2 UBFD1-201

Description

ubiquitin family domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050506-90]

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 385 variant alleles and maps to 192 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167159.2	UBFD1-201	1237	279aa	ENSDARP00000137446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KNV8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000189315.1	UBFD1-203	1446	279aa	ENSDARP00000146521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KNV8	-
ENSDART00000161582.2	UBFD1-204	1046	290aa	ENSDARP00000133491.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157580.2	UBFD1-202	673	153aa	ENSDARP00000140716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,237 bps, Translation length: 279 residues

Version

ENSDART00000167159.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.