Transcript: ENSDART00000167146.2 neurl1b-203

Description

neuralized E3 ubiquitin protein ligase 1B [Source:NCBI gene (formerly Entrezgene);Acc:553620]

Location

About this transcript

This transcript has 5 exons, is associated with 34 variant alleles and maps to 238 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161123.2	neurl1b-201	4003	560aa	ENSDARP00000141808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IYT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192635.1	neurl1b-204	2232	579aa	ENSDARP00000150576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QF54	-
ENSDART00000164841.2	neurl1b-202	647	186aa	ENSDARP00000134839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167146.2	neurl1b-203	1710	175aa	ENSDARP00000134991.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,710 bps, Translation length: 175 residues

Version

ENSDART00000167146.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.