Transcript: ENSDART00000167143.2 glyr1-202

Description

glyoxylate reductase 1 homolog (Arabidopsis) [Source:NCBI gene;Acc:493611]

Gene Synonyms

fb96g02, wu:fb96g02, zgc:103629

Location

About this transcript

This transcript has 13 exons, is annotated with 15 domains and features, is associated with 169 variant alleles and maps to 257 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167741.2	glyr1-203	3097	462aa	ENSDARP00000137468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167143.2	glyr1-202	1080	350aa	ENSDARP00000138777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IRW6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000168733.2	glyr1-204	830	274aa	ENSDARP00000140192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXQ1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000165240.2	glyr1-201	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,080 bps, Translation length: 350 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000167143.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.