Transcript: ENSDART00000167090.2 raraa-203

Description

retinoic acid receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-980526-284]

Location

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 2746 variant alleles and maps to 4 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079336.5	raraa-201	2492	444aa	ENSDARP00000073792.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90271	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000166796.2	raraa-202	1591	447aa	ENSDARP00000139532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	T2DKU4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167090.2	raraa-203	638	83aa	ENSDARP00000132356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 638 bps, Translation length: 83 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000167090.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.