Transcript: ENSDART00000167077.2 pdia3-201

Description

protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]

Gene Synonyms

erp57, sb:cb825

Location

Chromosome 25: 30,343,012-30,344,117 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 280 variant alleles and maps to 54 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000102640.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171137.2	pdia3-202	1753	459aa	ENSDARP00000134643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGN3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000167077.2	pdia3-201	845	90aa	ENSDARP00000131695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IBZ3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 845 bps, Translation length: 90 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000167077.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000167077.2 pdia3-201

Summary

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Transcript: ENSDART00000167077.2 pdia3-201

Summary

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