Transcript: ENSDART00000166949.3 si:ch211-282j17.13-202

Description

si:ch211-282j17.13 [Source:ZFIN;Acc:ZDB-GENE-160113-4]

Location

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 312 variant alleles and maps to 164 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126381.4	si:ch211-282j17.13-201	4965	523aa	ENSDARP00000106059.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FA55	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166949.3	si:ch211-282j17.13-202	1743	523aa	ENSDARP00000142028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FA55	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,743 bps, Translation length: 523 residues

Version

ENSDART00000166949.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]