Transcript: ENSDART00000166935.2 PRDM10-201

Description

PR domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050419-74]

Location

About this transcript

This transcript has 23 exons, is annotated with 59 domains and features, is associated with 690 variant alleles and maps to 330 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166935.2	PRDM10-201	5489	1176aa	ENSDARP00000131406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IF41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193084.1	PRDM10-203	5967	1176aa	ENSDARP00000147244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IF41	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168619.2	PRDM10-202	723	228aa	ENSDARP00000141992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 5,489 bps, Translation length: 1,176 residues

Version

ENSDART00000166935.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.