Transcript: ENSDART00000166895.2 ccn2b-201

Description

cellular communication network factor 2b [Source:ZFIN;Acc:ZDB-GENE-070705-82]

Location

About this transcript

This transcript has 5 exons, is annotated with 31 domains and features and maps to 223 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166895.2	ccn2b-201	1312	351aa	ENSDARP00000133091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PN60	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000187670.1	ccn2b-202	1567	347aa	ENSDARP00000147012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,312 bps, Translation length: 351 residues

Version

ENSDART00000166895.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.