Transcript: ENSDART00000166702.2 kars1-203

Description

lysyl-tRNA synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-021115-8]

Gene Synonyms

cb530, kars, wu:fa16h02, zgc:92483

Location

Chromosome 7: 67,434,679-67,439,541 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 215 variant alleles and maps to 35 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000103799.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162553.2	kars1-201	5341	602aa	ENSDARP00000136176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000178646.2	kars1-204	5210	577aa	ENSDARP00000144447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IC11	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000165971.2	kars1-202	2161	516aa	ENSDARP00000134262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKM7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000166702.2	kars1-203	546	182aa	ENSDARP00000131146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ICR3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 546 bps, Translation length: 182 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000166702.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000166702.2 kars1-203

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Transcript: ENSDART00000166702.2 kars1-203

Summary

About Us

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