Transcript: ENSDART00000166551.2 rap1ab-203

Description

RAP1A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040426-2738]

Location

Chromosome 11: 15,834,397-15,874,974 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 245 variant alleles and maps to 97 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000087346.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129526.3	rap1ab-201	1880	185aa	ENSDARP00000110237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165836.3	rap1ab-202	1814	185aa	ENSDARP00000130669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBI4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185946.1	rap1ab-204	1573	185aa	ENSDARP00000156627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBI4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166551.2	rap1ab-203	645	140aa	ENSDARP00000130283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 645 bps, Translation length: 140 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000166551.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000166551.2 rap1ab-203

Summary

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Transcript: ENSDART00000166551.2 rap1ab-203

Summary

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