Transcript: ENSDART00000166476.2 gata6-202

Description

GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1]

Gene Synonyms

GATA-5, cb603

Location

About this transcript

This transcript has 7 exons, is annotated with 31 domains and features, is associated with 12 variant alleles and maps to 180 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166476.2	gata6-202	2427	501aa	ENSDARP00000137653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NW63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157903.2	gata6-201	2054	501aa	ENSDARP00000136299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NW63	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167906.2	gata6-203	1797	401aa	ENSDARP00000129963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,427 bps, Translation length: 501 residues

Version

ENSDART00000166476.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.