Transcript: ENSDART00000166232.2 foxm1-204

Description

forkhead box M1 [Source:ZFIN;Acc:ZDB-GENE-040426-1275]

Gene Synonyms

foxm1l, zgc:63854

Location

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 261 variant alleles and maps to 26 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000008898.8	foxm1-201	3385	623aa	ENSDARP00000009248.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166232.2	foxm1-204	745	167aa	ENSDARP00000139832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IWD6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000165354.2	foxm1-203	695	232aa	ENSDARP00000135852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4INB2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000162390.2	foxm1-202	742	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 745 bps, Translation length: 167 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000166232.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.