Transcript: ENSDART00000166072.2 CHMP6-201

Description

charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]

Location

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 258 variant alleles and maps to 93 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000181861.1	CHMP6-203	2469	206aa	ENSDARP00000150680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503V0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166072.2	CHMP6-201	686	165aa	ENSDARP00000135498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000158043.2	CHMP6-202	667	206aa	ENSDARP00000130680.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503V0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 686 bps, Translation length: 165 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000166072.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.