Transcript: ENSDART00000165971.2 KARS1-201

Description

lysyl-tRNA synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-021115-8]

Location

About this transcript

This transcript has 12 exons, is annotated with 19 domains and features, is associated with 394 variant alleles and maps to 200 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162553.2	KARS1-203	5341	602aa	ENSDARP00000136176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000178646.2	KARS1-204	5210	577aa	ENSDARP00000144447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IC11	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165971.2	KARS1-201	2161	516aa	ENSDARP00000134262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000166702.2	KARS1-202	546	182aa	ENSDARP00000131146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,161 bps, Translation length: 516 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000165971.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.