Transcript: ENSDART00000165956.2 kmt5ab-203

Description

lysine methyltransferase 5Ab [Source:ZFIN;Acc:ZDB-GENE-071004-17]

Gene Synonyms

setd8b, wu:fc23f12, zgc:171649

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 222 variant alleles and maps to 22 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166893.2	kmt5ab-204	1611	315aa	ENSDARP00000136245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMZ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162057.2	kmt5ab-201	929	273aa	ENSDARP00000133676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IJ32	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000165956.2	kmt5ab-203	561	143aa	ENSDARP00000138155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPQ2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000163777.2	kmt5ab-202	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 561 bps, Translation length: 143 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000165956.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.