Transcript: ENSDART00000165872.2 im:7141269-202

Description

im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]

Location

About this transcript

This transcript has 3 exons, is annotated with 60 domains and features, is associated with 223 variant alleles and maps to 130 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165872.2	im:7141269-202	1555	368aa	ENSDARP00000142001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1RK28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160032.2	im:7141269-201	510	101aa	ENSDARP00000139093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000168745.2	im:7141269-203	491	89aa	ENSDARP00000131629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,555 bps, Translation length: 368 residues

Version

ENSDART00000165872.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.