Transcript: ENSDART00000165806.2 stk11ip-202

Description

serine/threonine kinase 11 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1022]

Location

About this transcript

This transcript has 25 exons, is annotated with 20 domains and features, is associated with 1183 variant alleles and maps to 141 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143248.4	stk11ip-201	6664	1160aa	ENSDARP00000119375.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5L2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000165806.2	stk11ip-202	3376	1070aa	ENSDARP00000134690.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIP9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 25, Coding exons: 24, Transcript length: 3,376 bps, Translation length: 1,070 residues

Version

ENSDART00000165806.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.