Transcript: ENSDART00000165782.2 pbx1a-203

Description

pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]

Gene Synonyms

fi29e01, pbx1b, wu:fi29e01, zgc:55265

Location

About this transcript

This transcript has 2 exons, is associated with 262 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165698.2	pbx1a-202	6743	428aa	ENSDARP00000138945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9I9B7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000165330.2	pbx1a-201	1835	346aa	ENSDARP00000136221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9I9B6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165782.2	pbx1a-203	1654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,654 bps,

Version

ENSDART00000165782.2

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.