Transcript: ENSDART00000165775.2 nlrc3-202

Description

NLR family, CARD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071119-1]

Gene Synonyms

NLR-A3, nod3

Location

About this transcript

This transcript has 6 exons, is annotated with 18 domains and features, is associated with 372 variant alleles and maps to 32 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000164405.2	nlrc3-201	2224	741aa	ENSDARP00000140992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IZ79	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000165775.2	nlrc3-202	521	174aa	ENSDARP00000131180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDV8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 521 bps, Translation length: 174 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000165775.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.