Transcript: ENSDART00000165675.2 p4ha3-202

Description

prolyl 4-hydroxylase, alpha polypeptide III [Source:ZFIN;Acc:ZDB-GENE-041010-4]

Gene Synonyms

WITHDRAWN: zgc:103728, si:dkey-260j18.3, zgc:103728

Location

About this transcript

This transcript has 4 exons, is associated with 85 variant alleles and maps to 86 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166880.2	p4ha3-203	2964	590aa	ENSDARP00000141707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000160302.2	p4ha3-201	1737	523aa	ENSDARP00000140459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IU86	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165675.2	p4ha3-202	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 690 bps,

Version

ENSDART00000165675.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.