Transcript: ENSDART00000165655.2 elk1-204

Description

ETS transcription factor ELK1 [Source:ZFIN;Acc:ZDB-GENE-090529-5]

Location

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 222 variant alleles and maps to 52 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110854.4	elk1-201	1566	521aa	ENSDARP00000098027.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F086	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158674.2	elk1-202	794	214aa	ENSDARP00000131419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IC78	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000165655.2	elk1-204	786	261aa	ENSDARP00000131641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDT6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000164122.2	elk1-203	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 786 bps, Translation length: 261 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000165655.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.