Transcript: ENSDART00000165654.2 ATP1B2-202

Description

ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]

Location

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 36 variant alleles and maps to 332 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160044.2	ATP1B2-205	2213	285aa	ENSDARP00000139476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DGL2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165654.2	ATP1B2-202	1960	252aa	ENSDARP00000133000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000166421.2	ATP1B2-203	967	239aa	ENSDARP00000138154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000172268.2	ATP1B2-204	620	91aa	ENSDARP00000141450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000164455.2	ATP1B2-201	374	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,960 bps, Translation length: 252 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000165654.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.