Transcript: ENSDART00000165636.2 elp1-202

Description

elongator acetyltransferase complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:5959]

Location

Chromosome 14: 6,257,687-6,263,305 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 249 variant alleles and maps to 5 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094204.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168174.2	elp1-204	4151	1311aa	ENSDARP00000135682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IJ07	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182280.1	elp1-206	3936	1311aa	ENSDARP00000145759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IJ07	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147184.3	elp1-201	3207	1068aa	ENSDARP00000121511.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000165636.2	elp1-202	547	158aa	ENSDARP00000135528.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000168470.2	elp1-205	904	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000168050.2	elp1-203	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 547 bps, Translation length: 158 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000165636.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000165636.2 elp1-202

Summary

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Transcript: ENSDART00000165636.2 elp1-202

Summary

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