Transcript: ENSDART00000165584.2 cry2-202

Description

cryptochrome circadian regulator 2 [Source:ZFIN;Acc:ZDB-GENE-010426-6]

Gene Synonyms

cry3, fe16d07, wu:fe16d07, zcry3

Location

About this transcript

This transcript has 4 exons, is associated with 294 variant alleles and maps to 66 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160866.2	cry2-201	2625	598aa	ENSDARP00000134736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZU53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165584.2	cry2-202	793	59aa	ENSDARP00000139726.1	Nonsense mediated decay	A0A0J9YJJ1	-
ENSDART00000170776.2	cry2-203	784	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 793 bps, Translation length: 59 residues

Version

ENSDART00000165584.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.