Transcript: ENSDART00000165534.2 nim1ka-202

Description

NIM1 serine/threonine protein kinase a [Source:ZFIN;Acc:ZDB-GENE-130530-744]

Location

About this transcript

This transcript has 3 exons and is associated with 293 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159168.2	nim1ka-201	2086	438aa	ENSDARP00000136499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7X7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192369.1	nim1ka-203	1317	438aa	ENSDARP00000150949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7X7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165534.2	nim1ka-202	309	52aa	ENSDARP00000141256.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 309 bps, Translation length: 52 residues

Version

ENSDART00000165534.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.