Transcript: ENSDART00000165452.2 tlcd4b-201

Description

TLC domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-041010-90]

Location

About this transcript

This transcript has 7 exons, is annotated with 28 domains and features, is associated with 862 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165452.2	tlcd4b-201	4321	264aa	ENSDARP00000130550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQ47 Q5XIY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171726.2	tlcd4b-202	2416	264aa	ENSDARP00000133377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQ47 Q5XIY2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 4,321 bps, Translation length: 264 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5XIY2

Version

ENSDART00000165452.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.