Transcript: ENSDART00000165077.3 cdh16-202

Description

cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]

Location

About this transcript

This transcript has 17 exons, is annotated with 58 domains and features, is associated with 1562 variant alleles and maps to 82 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000165077.3	cdh16-202	5564	819aa	ENSDARP00000135277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193378.1	cdh16-203	4935	481aa	ENSDARP00000147827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000109534.4	cdh16-201	4829	503aa	ENSDARP00000100794.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 5,564 bps, Translation length: 819 residues

Version

ENSDART00000165077.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]