Transcript: ENSDART00000164839.3 hoxc11b-201

Description

homeobox C11b [Source:ZFIN;Acc:ZDB-GENE-000822-3]

Location

About this transcript

This transcript has 3 exons, is annotated with 19 domains and features, is associated with 262 variant alleles and maps to 273 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186854.1	hoxc11b-202	4372	306aa	ENSDARP00000156809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDM3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164839.3	hoxc11b-201	2649	306aa	ENSDARP00000131152.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDM3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,649 bps, Translation length: 306 residues

Version

ENSDART00000164839.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.