Transcript: ENSDART00000164794.2 si:dkey-102m7.3-203

Description

si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]

Location

Chromosome 14: 14,836,594-14,838,118 forward strand.

About this transcript

This transcript has 4 exons, is associated with 20 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100366.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000166728.2	si:dkey-102m7.3-204	749	42aa	ENSDARP00000136512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170317.2	si:dkey-102m7.3-205	940	42aa	ENSDARP00000131348.1	Nonsense mediated decay	-
ENSDART00000164794.2	si:dkey-102m7.3-203	382	41aa	ENSDARP00000132383.1	Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000162604.2	si:dkey-102m7.3-201	497	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000170954.2	si:dkey-102m7.3-206	679	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000164198.2	si:dkey-102m7.3-202	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 382 bps, Translation length: 41 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000164794.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000164794.2 si:dkey-102m7.3-203

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Transcript: ENSDART00000164794.2 si:dkey-102m7.3-203

Summary

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