Transcript: ENSDART00000164759.2 cntn4-202

Description

contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]

Gene Synonyms

zgc:153573

Location

About this transcript

This transcript has 18 exons, is annotated with 54 domains and features, is associated with 4467 variant alleles and maps to 135 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159863.2	cntn4-201	3444	1028aa	ENSDARP00000134774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGN2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164759.2	cntn4-202	2815	882aa	ENSDARP00000136623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UKP7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,815 bps, Translation length: 882 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000164759.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.