Transcript: ENSDART00000164551.2 NRG2-204

Description

neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]

Location

Chromosome 14: 8,343,498-8,422,877 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 1620 variant alleles and maps to 21 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000086585.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129055.3	NRG2-201	4186	705aa	ENSDARP00000108874.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FGA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000127494.3	NRG2-202	1873	599aa	ENSDARP00000109596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000164551.2	NRG2-204	529	176aa	ENSDARP00000136138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000171586.2	NRG2-203	798	138aa	ENSDARP00000140639.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 529 bps, Translation length: 176 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000164551.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000164551.2 NRG2-204

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Transcript: ENSDART00000164551.2 NRG2-204

Summary

About Us

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