Transcript: ENSDART00000163980.2 glrx2-202

Description

glutaredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040718-101]

Gene Synonyms

grx2, zgc:92698

Location

Chromosome 22: 24,214,665-24,218,858 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 158 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100944.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162227.2	glrx2-201	1003	170aa	ENSDARP00000136884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000167996.2	glrx2-203	788	152aa	ENSDARP00000140532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXU6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000163980.2	glrx2-202	575	162aa	ENSDARP00000133122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFC0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 575 bps, Translation length: 162 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000163980.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000163980.2 glrx2-202

Summary

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Transcript: ENSDART00000163980.2 glrx2-202

Summary

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