Transcript: ENSDART00000163939.3 zgc:154142-201

Description

zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]

Location

About this transcript

This transcript has 20 exons, is annotated with 58 domains and features, is associated with 721 variant alleles and maps to 169 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000163939.3	zgc:154142-201	4802	1090aa	ENSDARP00000131066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PKM4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165111.2	zgc:154142-202	2593	846aa	ENSDARP00000130164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 4,802 bps, Translation length: 1,090 residues

Version

ENSDART00000163939.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.