Transcript: ENSDART00000163862.2 nfrkb-202

Description

nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]

Gene Synonyms

fi86h10, si:dkey-92k1.11, wu:fi86h10

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 66 variant alleles and maps to 24 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170556.2	nfrkb-203	4459	1290aa	ENSDARP00000135127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IL86	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163277.2	nfrkb-201	982	281aa	ENSDARP00000129982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9J0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000163862.2	nfrkb-202	755	165aa	ENSDARP00000130778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDM1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 755 bps, Translation length: 165 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000163862.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.