Transcript: ENSDART00000163585.2 csf1ra-201

Description

colony stimulating factor 1 receptor, a [Source:ZFIN;Acc:ZDB-GENE-001205-1]

Location

About this transcript

This transcript has 20 exons, is annotated with 39 domains and features, is associated with 666 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000183810.1	csf1ra-203	3522	977aa	ENSDARP00000148187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QKN6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163585.2	csf1ra-201	3459	883aa	ENSDARP00000134935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184370.1	csf1ra-204	3004	696aa	ENSDARP00000156167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000169652.2	csf1ra-202	2788	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 3,459 bps, Translation length: 883 residues

Version

ENSDART00000163585.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.