Transcript: ENSDART00000163498.2 si:ch73-281i18.7-203

Description

si:ch73-281i18.7 [Source:ZFIN;Acc:ZDB-GENE-141219-35]

Location

About this transcript

This transcript has 6 exons and maps to 169 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161799.2	si:ch73-281i18.7-202	935	174aa	ENSDARP00000135492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4INY9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163498.2	si:ch73-281i18.7-203	924	59aa	ENSDARP00000138785.1	Nonsense mediated decay	-	-
ENSDART00000123035.3	si:ch73-281i18.7-201	773	44aa	ENSDARP00000104814.2	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 924 bps, Translation length: 59 residues

Version

ENSDART00000163498.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.