Transcript: ENSDART00000163444.2 lrwd1-203

Description

leucine-rich repeats and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5335]

Location

Chromosome 5: 61,475,451-61,504,525 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 18 domains and features, is associated with 671 variant alleles and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035147.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000050906.6	lrwd1-201	2660	763aa	ENSDARP00000050905.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PX45 B0R160	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000163444.2	lrwd1-203	2307	768aa	ENSDARP00000134872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKV7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000127521.3	lrwd1-202	665	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,307 bps, Translation length: 768 residues

Version

ENSDART00000163444.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000163444.2 lrwd1-203

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Transcript: ENSDART00000163444.2 lrwd1-203

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