Transcript: ENSDART00000163308.2 herc7-201

Description

hect domain and RLD 7 [Source:ZFIN;Acc:ZDB-GENE-091204-164]

Location

About this transcript

This transcript has 1 exon, is annotated with 8 domains and features, is associated with 271 variant alleles and maps to 74 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000171579.2	herc7-203	2192	424aa	ENSDARP00000132243.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181454.1	herc7-204	2515	358aa	ENSDARP00000150534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000163308.2	herc7-201	869	289aa	ENSDARP00000141118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000163995.2	herc7-202	585	195aa	ENSDARP00000136358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 869 bps, Translation length: 289 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000163308.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.