Transcript: ENSDART00000163228.2 cfh-203

Description

complement factor H [Source:ZFIN;Acc:ZDB-GENE-050208-661]

Gene Synonyms

im:7147412, si:ch211-207o17.2

Location

Chromosome 22: 23,641,801-23,668,468 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 66 domains and features, is associated with 231 variant alleles and maps to 127 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100442.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000167106.2	cfh-204	2997	901aa	ENSDARP00000136634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000163228.2	cfh-203	3412	896aa	ENSDARP00000137998.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000159622.2	cfh-202	1838	603aa	ENSDARP00000140648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000158665.2	cfh-201	708	236aa	ENSDARP00000131647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,412 bps, Translation length: 896 residues

Version

ENSDART00000163228.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000163228.2 cfh-203

Summary

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Transcript: ENSDART00000163228.2 cfh-203

Summary

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