Transcript: ENSDART00000163162.2 CPNE3-201

Description

copine III [Source:ZFIN;Acc:ZDB-GENE-040426-763]

Location

About this transcript

This transcript has 16 exons, is annotated with 20 domains and features, is associated with 1184 variant alleles and maps to 196 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000163162.2	CPNE3-201	2405	532aa	ENSDARP00000140742.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IUW1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172335.2	CPNE3-203	1930	540aa	ENSDARP00000139825.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9D2	-
ENSDART00000183707.1	CPNE3-202	1615	532aa	ENSDARP00000145933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IUW1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,405 bps, Translation length: 532 residues

Version

ENSDART00000163162.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.