Transcript: ENSDART00000163100.2 ARHGAP39-201

Description

Rho GTPase activating protein 39 [Source:ZFIN;Acc:ZDB-GENE-041014-247]

Location

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 271 variant alleles and maps to 220 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000166651.2	ARHGAP39-203	2820	939aa	ENSDARP00000132870.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185863.1	ARHGAP39-202	2763	920aa	ENSDARP00000157070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000163100.2	ARHGAP39-201	365	121aa	ENSDARP00000135037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 365 bps, Translation length: 121 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000163100.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.